96
Abstract Views
44
PDF Download
Biotechnology

Evaluation of tris–EDTA pre-hydrated non-FTA dried blood spot as a low-cost medium for room-temperature DNA sample transport

, , , , ,
Pages 48-58

Abstract

Dried Blood Spot (DBS) is a practical method for collecting DNA samples; however, DNA stability on non-FTA filter paper such as Whatman No. 42 remains limited. Pre-hydration of the DBS matrix with Tris–EDTA (TE) buffer has the potential to enhance DNA stability during room-temperature storage. This study aimed to evaluate the effectiveness of TE-hydrated DBS in maintaining DNA stability for short-term storage and transport. A paired quasi-experimental design was applied in which each subject provided two DBS samples: one on TE-hydrated paper and one on unmodified paper. Twenty subjects were recruited using convenience sampling, generating 40 DBS samples for analysis. TE hydration significantly increased DNA concentration compared with unmodified DBS (p < 0.01) and increased the proportion of samples with acceptable purity (A260/A280 = 1.8–2.0) (p = 0.031). Hydration with TE buffer was therefore effective in improving DNA yield, while its effect on DNA purity remained sensitive to technical variability and outlier influence. These findings indicate that TE-hydrated DBS has potential as an alternative medium for short-term DNA transport at room temperature. Further validation involving extended storage duration and downstream molecular testing is required.

There is no Figure or data content available for this article

References

  • 1. Tan SC, Yiap BC. DNA, RNA, and protein extraction: the past and the present. J Biomed Biotechnol. 2009;2009:574398. doi:10.1155/2009/574398
  • https://doi.org/10.1155/2009/574398
  • 2. Lim MD. Dried blood spots for global health diagnostics and surveillance: opportunities and challenges. Am J Trop Med Hyg. 2018;99(2):256-265. doi:10.4269/ajtmh.17-0889
  • https://doi.org/10.4269/ajtmh.17-0889
  • 3. Kumar A, Mhatre S, Godbole S, et al. Optimization of extraction of genomic DNA from archived dried blood spot (DBS): potential application in epidemiological research and biobanking. Gates Open Res. 2019;2:57. doi:10.12688/gatesopenres.12855.2
  • https://doi.org/10.12688/gatesopenres.12855.2
  • 4. Nugroho K, Satyawan D, Tasma IM, Lestari P. Genomic DNA extraction: the critical stage in plant molecular analysis. J AgroBiogen. 2022;18(1):33-44. doi:10.21082/jbio.v18n1.2022.p33-44
  • https://doi.org/10.21082/jbio.v18n1.2022.p33-44
  • 5. Grüner N, Stambouli O, Ross RS. Dried blood spots—preparing and processing for use in immunoassays and molecular techniques. J Vis Exp. 2015;(97):52619. doi:10.3791/52619
  • https://doi.org/10.3791/52619
  • 6. Garg R, Ramachandran K, Jayashree S, Agarwal R, Gupta E. Evaluation of blood samples collected by dried blood spots for hepatitis B virus DNA quantitation. J Clin Virol Plus. 2022;2(4):100111. doi:10.1016/j.jcvp.2022.100111
  • https://doi.org/10.1016/j.jcvp.2022.100111
  • 7. Therrell BL, Padilla CD, Borrajo GJC, et al. Current status of newborn bloodspot screening worldwide 2024. Int J Neonatal Screen. 2024;10(2):38. doi:10.3390/ijns10020038
  • https://doi.org/10.3390/ijns10020038
  • 8. Zakaria R, Allen KJ, Koplin JJ, Roche P, Greapes RF. Advantages and challenges of dried blood spot analysis by mass spectrometry. Clin Biochem. 2016;49(4-5):288-317. doi:10.1016/j.clinbiochem.2015.11.001
  • https://doi.org/10.1016/j.clinbiochem.2015.11.001
  • 9. Anvara MS, Gharib A, Abolhasani M, et al. Pre-analytical practices in molecular diagnostic tests. Iran J Pathol. 2020;16(1):1-19. doi:10.30699/ijp.2020.124315.2357
  • https://doi.org/10.30699/ijp.2020.124315.2357
  • 10. Schwartz A, Baidjoe A, Rosenthal PJ, et al. Storage and extraction methods influence amplification of Plasmodium DNA from DBS. Am J Trop Med Hyg. 2015;92(5):922-925. doi:10.4269/ajtmh.14-0602
  • https://doi.org/10.4269/ajtmh.14-0602
  • 11. Strøm GEA, Tellevik MG, Hanevik K, et al. Comparison of DNA extraction methods from dried blood spots. Trans R Soc Trop Med Hyg. 2014;108(8):488-494. doi:10.1093/trstmh/tru084
  • https://doi.org/10.1093/trstmh/tru084
  • 12. Choi EH, Lee SK, Ihm C, Sohn YH. Rapid DNA extraction from dried blood spots. Osong Public Health Res Perspect. 2014;5(6):351-356. doi:10.1016/j.phrp.2014.09.005
  • https://doi.org/10.1016/j.phrp.2014.09.005
  • 13. Van Biesen N, Cools P, Meyers E. DNA extraction optimization from DBS. Pediatr Rep. 2025;17(2):30. doi:10.3390/pediatric17020030
  • 14. Panda BB, Meher AS, Hazra RK. Comparison of DNA isolation methods from DBS for malaria. J Parasit Dis. 2019;43(3):337-343. doi:10.1007/s12639-019-01136-0
  • https://doi.org/10.1007/s12639-019-01136-0
  • 15. Rahikainen AL, Palo JU, de Leeuw W, et al. DNA quality from blood stored on FTA cards. Forensic Sci Int. 2016;261:148-153. doi:10.1016/j.forsciint.2016.02.014
  • 16. Brodzka S, Kamiński P, Baszyński J, et al. Optimized protocol for DNA extraction from whole blood. Cell Physiol Biochem. 2025;59(1):47-56. doi:10.33594/000000756
  • 17. Bruijns B, Hoekema T, Oomens L, et al. Spectrophotometric versus fluorometric DNA quantification. Analytica. 2022;3(3):371-384. doi:10.3390/analytica3030025
  • https://doi.org/10.3390/analytica3030025
  • 18. Thermo Fisher Scientific. NanoDrop nucleic acid purity ratios technical note. 2023.
  • 19. Perwitasari DA, Noor Faridah I, Ratnasari YA, et al. DNA isolation from FTA cards comparison. J Ilmu Kefarmasian Indonesia. 2020;18(2):241-245.
  • 20. Maliza R, Pratiwi LS, Perwitasari DA. DNA quality on Whatman paper using Chelex. J Muhammadiyah Med Lab Technol. 2021;4(2):113.
  • 21. Ainun F, Wasdili Q, Rihibiha DD, Permana EV. Papain protease for DNA extraction. J Analis Kesehatan Klinik Sains. 2024;12(1):1-9.
  • 22. Hailemariam Z, Aseffa A, Howe R, et al. FTA card preservation for nucleic acid stability. Ticks Tick Borne Dis. 2017;8(1):108-112. doi:10.1016/j.ttbdis.2016.10.016
  • 23. Moat SJ, George RS, Carling RS. DBS use in inherited metabolic disorder monitoring. Int J Neonatal Screen. 2020;6(2):26.
  • 24. Shen CH. Nucleic acids. In: Diagnostic Molecular Biology. Elsevier; 2023.
  • 25. Kim YT, Choi EH, Son BK, et al. Effects of storage buffer on DNA integrity. Clin Biochem. 2012;44:24-30.
  • 26. Ambers A, Turnbough M, Benjamin R, et al. DNA repair in forensic samples. Int J Legal Med. 2014;128(6):913-921.
  • 27. Mawardi A, Maury HK, Maladan Y. Amplification comparison DBS and venous specimens. J Biol Papua. 2020;12(1):10-18.
  • 28. Fitriya RT, Ibrahim M, Lisdiana L. Modified DNA isolation kit and CTAB. J LenteraBio. 2015;4(1):87-92.
  • 29. Brodzka S, Kamiński P, Baszyński J, et al. Whole blood DNA extraction validation. Cell Physiol Biochem. 2025.
  • 30. Hailemariam Z, Aseffa A, Howe R, et al. FTA card nucleic acid stability. Ticks Tick Borne Dis. 2017.
  • 31. Shen CH. Nucleic acids. Diagnostic Molecular Biology. 2023.
  • 32. Therrell BL, Padilla CD, Borrajo GJC, et al. Newborn DBS global status. Int J Neonatal Screen. 2024.
  • 33. Bruijns B, Hoekema T, Oomens L, et al. Performance of DNA quantification methods. Analytica. 2022.
There is no Supplemental content for this article.

How to Cite This

Febriyani, P. D. Z., Syailendra, A., Dani, H., Ocktariyana, Pasha, A. R., & Aini, S. M. (2026). Evaluation of tris–EDTA pre-hydrated non-FTA dried blood spot as a low-cost medium for room-temperature DNA sample transport. Jurnal Teknologi Laboratorium, 15(1), 48–58. https://doi.org/10.29238/teknolabjournal.v15i1.712

Article Metrics

Download Statistics

Downloads

Download data is not yet available.

Other Statistics

Verify authenticity via CrossMark

Copyright and Permissions

Creative Commons License

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.

Publishing your paper with Jurnal Teknologi Laboratorium (JTL) means that the author or authors retain the copyright in the paper. JTL granted an exclusive reuse license by the author(s), but the author(s) are able to put the paper onto a website, distribute it to colleagues, give it to students, use it in your thesis etc, even commercially. The author(s) can reuse the figures and tables and other information contained in their paper published by JTL in future papers or work without having to ask anyone for permission, provided that the figures, tables or other information that is included in the new paper or work properly references the published paper as the source of the figures, tables or other information, and the new paper or work is not direct at private monetary gain or commercial advantage.

JTL journal provides immediate open access to its content on the principle that making research freely available to the public supports a greater global exchange of knowledge. This journal is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License. This license lets others remix, transform, and build upon the material for any purpose, even commercially.

JTL journal Open Access articles are distributed under this Creative Commons Attribution-ShareAlike 4.0 International License (CC BY-SA). Articles can be read and shared for All purposes under the following conditions:

  • BY: You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
  • SA:  If you remix, transform, or build upon the material, you must distribute your contributions under the same license as the original.

Data Availability